Additional file 2 of TNFPred: identifying tumor necrosis factors using hybrid features based on word embeddings

Additional file 2 Visualization of feature sets. Fig. S1a: Visualization corresponding to protein feature vectors comprised from 1-g embedding vectors with perplexity equal to 25. Fig. S1b: Visualization corresponding to protein feature vectors comprised from 1-g embedding vectors with perplexity equal to 50. Fig. S2a: Visualization corresponding to protein feature vectors comprised from 2-g embedding vectors with perplexity equal to 25. Fig. S2b: Visualization corresponding to protein feature vectors comprised from 2-g embedding vectors with perplexity equal to 50. Fig. S3a: Visualization corresponding to protein feature vectors comprised from 3-g embedding vectors with perplexity equal to 25. Fig. S3b: Visualization corresponding to protein feature vectors comprised from 3-g embedding vectors with perplexity equal to 50. Fig. S4a: Visualization corresponding to protein feature vectors comprised from 4-g embedding vectors with perplexity equal to 25. Fig. S4b: Visualization corresponding to protein feature vectors comprised from 4-g embedding vectors with perplexity equal to 50. Fig. S5a: Visualization corresponding to protein feature vectors comprised from 5-g embedding vectors with perplexity equal to 25. Fig. S5b: Visualization corresponding to protein feature vectors comprised from 5-g embedding vectors with perplexity equal to 50. Fig. S6a: Visualization corresponding to protein feature vectors comprised from 1-g and 2-g embedding combined vectors with perplexity equal to 25. Fig. S6b: Visualization corresponding to protein feature vectors comprised from 1-g and 2-g embedding combined vectors with perplexity equal to 50. Fig. S7a: Visualization corresponding to protein feature vectors comprised from 1-g and 3-g embedding combined vectors with perplexity equal to 25. Fig. S7b: Visualization corresponding to protein feature vectors comprised from the combination of 1-g and 3-g embedding combined vectors with perplexity equal to 50. Fig. S8a: Visualization corresponding to protein feature vectors comprised from 2-g and 3-g embedding combined vectors with perplexity equal to 25. Fig. S8b: Visualization corresponding to protein feature vectors comprised from the combination of 2-g and 3-g embedding combined vectors with perplexity equal to 50.