Projects per year
Personal profile
Education
- 2000 Ph.D., Biochemistry, University of Cambridge, (Pembroke College), U.K.
- 1991 MSc., Biology, Tunghai University, Taiwan
- 1987 BA, Literature and Foreign Languages, Tunghai University, Taiwan
Experience
- 2009- Associate Professor, Graduate Institute of Biomedical Informatics, Taipei Medical University
- 2003-2009 Assistant Professor, Graduate Institute of Biomedical Informatics, Taipei Medical University
- 2000-2003 Postdoctoral Fellow, National Health Research Institute
Awards
- 2015 Best University Tutor in Taipei Medical University
- 2015 Award, NIH/NINDS Summer Internship Program Research Poster Competition
- 2015 Award, MoE Internship Abroad
- 2015-2017 MOST Award, Multivariate bioinformatics analysis of Taiwanese cancer RNA-seq.
- 2014 MOST Award, Association between human endogenous retrovirus and cancers using RNA-seq data
- 2011 MOST Award, A Revolutionary Approach for Disease-associated Pathways Identification: From Genome-wide Network Construction, Pathway Discovery, to Pathway-based Analysis and Validation
- 2000 MOHW Translation Research Award, Translational research: from systems biology to drug target for cancer metastasis.
Research Interests
- Bioinformatics
- Next Generation Sequence data analysis
- Gene Expression Microarray data analysis
- Human Endogenous Retroviruses
- Cancer Genome Biology
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Cloud-Based Graph Representation Learning of Biological Pathways with Proteo-Transcriptomics for Cancer Systems Biology
8/1/22 → 7/31/23
Project: A - Government Institution › b - Ministry of Science and Technology
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植基於圖技術的雲癌症精準醫學之機器學習模組
8/1/20 → 7/1/21
Project: A - Government Institution › b - Ministry of Science and Technology
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以RNA-seq分析來探討HIV提高non-AIDS-defining malignancies罹患率之分子機制
7/1/17 → 2/28/18
Project: A - Government Institution › b - Ministry of Science and Technology
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Multivariate Bioinformatics Analysis of Taiwanese Cancer RNA-seq data to Study Human Endogenous Retroviruses as Carcinogens(2/2)
8/1/16 → 7/31/17
Project: A - Government Institution › b - Ministry of Science and Technology
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Multivariate Bioinformatics Analysis of Taiwanese Cancer RNA-Seq Data to Study Human Endogenous Retroviruses as Carcinogens
8/1/15 → 7/31/16
Project: A - Government Institution › b - Ministry of Science and Technology
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Humoral Immunogenicity and Reactogenicity of the Standard ChAdOx1 nCoV-19 Vaccination in Taiwan
Chang, J. H., Chiou, J. F., Hung, C. S., Liu, M. C., Chang, H. W., Hong, S. Y., Wang, C. Y., Lin, Y. L., Hsieh, Y. C., Chung, C. L., Su, Y. S., Hsiao, S. T. S., Liu, D., Liang, J. J., Liao, C. C., Chang, C. S., Lai, K. S. L., Chuang, H. C., Chien, K. L., Wu, W. C., & 6 others, Feb 2022, In: Vaccines. 10, 2, 312.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
l-Carnitine reduces reactive oxygen species/endoplasmic reticulum stress and maintains mitochondrial function during autophagy-mediated cell apoptosis in perfluorooctanesulfonate-treated renal tubular cells
Lee, Y. C. G., Chou, H. C., Chen, Y. T., Tung, S. Y., Ko, T. L., Buyandelger, B., Wen, L. L. & Juan, S. H., Mar 18 2022, In: Scientific Reports. 12, 1, p. 4673 4673.Research output: Contribution to journal › Article › peer-review
Open Access6 Citations (Scopus) -
Proteotranscriptomics Analysis Reveals Signature Pathways Associated with Colorectal Cancer Progression: a Pilot Study
Lim, H. G. M., Fann, Y. C. & Lee, Y. C. G., 2022, Proceedings - IEEE 22nd International Conference on Bioinformatics and Bioengineering, BIBE 2022. Institute of Electrical and Electronics Engineers Inc., p. 225-230 6 p. (Proceedings - IEEE 22nd International Conference on Bioinformatics and Bioengineering, BIBE 2022).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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Robust Mutation Profiling of SARS‐CoV‐2 Variants from Multiple Raw Illumina Sequencing Data with Cloud Workflow
Lim, H. G. M., Hsiao, S. H., Fann, Y. C. & Lee, Y. C. G., Apr 2022, In: Genes. 13, 4, 686.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
Exerting the appropriate application of methylprednisolone in acute spinal cord injury based on time course transcriptomics analysis
Yang, L. Y., Tsai, M. Y., Juan, S. H., Chang, S. F., Yu, C. T. R., Lin, J. C., Johnson, K. R., Lim, H. G. M., Fann, Y. C. & Lee, Y. C. G., Dec 1 2021, In: International journal of molecular sciences. 22, 23, 13024.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus)