Yu-Wei Wu

Search results

• MOESM3 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Klingeman, D. M. (Creator), Henrissat, B. (Creator), Elkins, J. G. (Creator), Wu, Y.-W. (Creator), Podar, M. (Creator), Yang, Z. K. (Creator), Holwerda, E. K. (Creator), Shao, X. (Contributor), Brown, S. D. (Creator), Tian, L. (Creator), Richard, T. L. (Creator), Whitham, J. M. (Creator), Lombard, V. (Creator), Lynd, L. R. (Creator) & Liang, X. (Contributor), Figshare, 2018

  DOI: 10.6084/m9.figshare.7057073.v1, https://doi.org/10.6084%2Fm9.figshare.7057073.v1

  Dataset

• MOESM12 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Elkins, J. G. (Creator), Tian, L. (Creator), Richard, T. L. (Creator), Henrissat, B. (Creator), Brown, S. D. (Creator), Lombard, V. (Creator), Wu, Y.-W. (Creator), Yang, Z. K. (Creator), Shao, X. (Contributor), Holwerda, E. K. (Creator), Klingeman, D. M. (Creator), Liang, X. (Contributor), Lynd, L. R. (Creator), Whitham, J. M. (Creator) & Podar, M. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.7057010.v1, https://doi.org/10.6084%2Fm9.figshare.7057010.v1

  Dataset

• Additional file 2 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986900.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986900/1

  Dataset

• MOESM9 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Yang, Z. K. (Creator), Holwerda, E. K. (Creator), Shao, X. (Contributor), Podar, M. (Creator), Henrissat, B. (Creator), Liang, X. (Contributor), Lombard, V. (Creator), Whitham, J. M. (Creator), Lynd, L. R. (Creator), Wu, Y.-W. (Creator), Tian, L. (Creator), Brown, S. D. (Creator), Elkins, J. G. (Creator), Klingeman, D. M. (Creator) & Richard, T. L. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.7057115.v1, https://doi.org/10.6084%2Fm9.figshare.7057115.v1

  Dataset

• MOESM4 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Brown, S. D. (Creator), Richard, T. L. (Creator), Henrissat, B. (Creator), Holwerda, E. K. (Creator), Shao, X. (Contributor), Wu, Y.-W. (Creator), Whitham, J. M. (Creator), Yang, Z. K. (Creator), Klingeman, D. M. (Creator), Lynd, L. R. (Creator), Liang, X. (Contributor), Elkins, J. G. (Creator), Podar, M. (Creator), Tian, L. (Creator) & Lombard, V. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.7057082.v1, https://doi.org/10.6084%2Fm9.figshare.7057082.v1

  Dataset

• Additional file 11 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986891.v1, https://springernature.figshare.com/articles/dataset/Additional_file_11_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986891/1

  Dataset

• Additional file 3 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986903.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986903/1

  Dataset

• Additional file 1: Figure S1. of ezTree: an automated pipeline for identifying phylogenetic marker genes and inferring evolutionary relationships among uncultivated prokaryotic draft genomes

  Wu, Y.-W. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.5808150.v1, https://doi.org/10.6084%2Fm9.figshare.5808150.v1

  Dataset

• Additional file 8 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986918.v1, https://springernature.figshare.com/articles/dataset/Additional_file_8_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986918/1

  Dataset

• Additional file 6 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986912.v1, https://springernature.figshare.com/articles/dataset/Additional_file_6_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986912/1

  Dataset

• Additional file 10 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986888.v1, https://springernature.figshare.com/articles/dataset/Additional_file_10_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986888/1

  Dataset

• Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction

  Tom, L. M. (Creator), Aulitto, M. (Creator), Wu, Y.-W. (Creator), Deng, K. (Creator), Gao, Y. (Creator), Xiao, N. (Creator), Rodriguez, B. G. (Creator), Louime, C. (Creator), Northen, T. R. (Creator), Eudes, A. (Creator), Mortimer, J. C. (Creator), Adams, P. D. (Creator), Scheller, H. V. (Creator), Simmons, B. A. (Creator), Ceja-Navarro, J. A. (Creator) & Singer, S. W. (Creator), Figshare, 2022

  DOI: 10.6084/m9.figshare.c.6264237.v1, https://springernature.figshare.com/collections/Low-abundance_populations_distinguish_microbiome_performance_in_plant_cell_wall_deconstruction/6264237/1

  Dataset

• Additional file 4 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986906.v1, https://springernature.figshare.com/articles/dataset/Additional_file_4_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986906/1

  Dataset

• Characterization of TMAO productivity from carnitine challenge facilitates personalized nutrition and microbiome signatures discovery

  Wu, W.-K. (Creator), Panyod, S. (Contributor), Liu, P.-Y. (Contributor), Chen, C.-C. (Contributor), Kao, H.-L. (Contributor), Chuang, H.-L. (Contributor), Chen, Y.-H. (Contributor), Zou, H.-B. (Contributor), Kuo, H.-C. (Creator), Kuo, C.-H. (Creator), Liao, B.-Y. (Contributor), Chiu, T. H. T. (Creator), Chung, C.-H. (Contributor), Lin, A.Y.-C. (Creator), Lee, Y.-C. (Contributor), Tang, S.-L. (Creator), Wang, J.-T. (Contributor), Wu, Y.-W. (Creator), Hsu, C.-C. (Contributor), Sheen, L.-Y. (Contributor), Orekhov, A. N. (Creator) & Wu, M.-S. (Creator), Figshare, 2020

  DOI: 10.6084/m9.figshare.c.5214059.v1, https://springernature.figshare.com/collections/Characterization_of_TMAO_productivity_from_carnitine_challenge_facilitates_personalized_nutrition_and_microbiome_signatures_discovery/5214059/1

  Dataset

• Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Wu, Y.-W. (Creator), Whitham, J. M. (Creator), Tian, L. (Creator), Liang, X. (Contributor), Lombard, V. (Creator), Brown, S. D. (Creator), Klingeman, D. M. (Creator), Henrissat, B. (Creator), Yang, Z. K. (Creator), Shao, X. (Contributor), Richard, T. L. (Creator), Holwerda, E. K. (Creator), Lynd, L. R. (Creator), Podar, M. (Creator) & Elkins, J. G. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.c.4224131.v1, https://doi.org/10.6084%2Fm9.figshare.c.4224131.v1

  Dataset

• MOESM8 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Elkins, J. G. (Creator), Brown, S. D. (Creator), Lynd, L. R. (Creator), Richard, T. L. (Creator), Tian, L. (Creator), Henrissat, B. (Creator), Whitham, J. M. (Creator), Holwerda, E. K. (Creator), Klingeman, D. M. (Creator), Wu, Y.-W. (Creator), Lombard, V. (Creator), Yang, Z. K. (Creator), Shao, X. (Contributor), Podar, M. (Creator) & Liang, X. (Contributor), Figshare, 2018

  DOI: 10.6084/m9.figshare.7057112.v1, https://doi.org/10.6084%2Fm9.figshare.7057112.v1

  Dataset

• MOESM6 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Wu, Y.-W. (Creator), Liang, X. (Contributor), Richard, T. L. (Creator), Yang, Z. K. (Creator), Brown, S. D. (Creator), Holwerda, E. K. (Creator), Lombard, V. (Creator), Lynd, L. R. (Creator), Klingeman, D. M. (Creator), Elkins, J. G. (Creator), Whitham, J. M. (Creator), Shao, X. (Contributor), Podar, M. (Creator), Tian, L. (Creator) & Henrissat, B. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.7057106.v1, https://doi.org/10.6084%2Fm9.figshare.7057106.v1

  Dataset

• MOESM11 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Klingeman, D. M. (Creator), Henrissat, B. (Creator), Elkins, J. G. (Creator), Tian, L. (Creator), Shao, X. (Contributor), Yang, Z. K. (Creator), Brown, S. D. (Creator), Podar, M. (Creator), Richard, T. L. (Creator), Wu, Y.-W. (Creator), Whitham, J. M. (Creator), Liang, X. (Contributor), Lynd, L. R. (Creator), Holwerda, E. K. (Creator) & Lombard, V. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.7056986.v1, https://doi.org/10.6084%2Fm9.figshare.7056986.v1

  Dataset

• Additional file 9 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986921.v1, https://springernature.figshare.com/articles/dataset/Additional_file_9_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986921/1

  Dataset

• Metagenomic, phylogenetic, and functional characterization of predominant endolithic green sulfur bacteria in the coral Isopora palifera

  Yang, C.-M. (Creator), Wu, Y.-W. (Creator), Lee, D.-C. (Contributor), Huang, L. (Creator), Yamashiro, H. (Creator), Lu, C.-Y. (Contributor), Shih, C.-J. (Contributor), Wu, Y.-T. (Creator), Yang, S.-H. (Creator), Jane, W.-N. (Contributor), Hsiao, S.S.-Y. (Creator), Wada, N. (Creator), Tandon, K. (Contributor), Wang, L.-T. (Creator), Denis, V. (Creator), Liu, C.-T. (Contributor), Tang, S.-L. (Creator) & Lee, T.-C. (Contributor), Figshare, 2019

  DOI: 10.6084/m9.figshare.c.4355186.v1, https://doi.org/10.6084%2Fm9.figshare.c.4355186.v1

  Dataset

• MOESM10 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

  Podar, M. (Creator), Yang, Z. K. (Creator), Wu, Y.-W. (Creator), Holwerda, E. K. (Creator), Shao, X. (Contributor), Brown, S. D. (Creator), Lombard, V. (Creator), Lynd, L. R. (Creator), Henrissat, B. (Creator), Liang, X. (Contributor), Richard, T. L. (Creator), Tian, L. (Creator), Elkins, J. G. (Creator), Whitham, J. M. (Creator) & Klingeman, D. M. (Creator), Figshare, 2018

  DOI: 10.6084/m9.figshare.7056971.v1, https://doi.org/10.6084%2Fm9.figshare.7056971.v1

  Dataset

• Additional file 1 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Lin, P.-T. (Creator), Her, H.-L. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986894.v1, https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986894/1

  Dataset

• Additional file 5 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986909.v1, https://springernature.figshare.com/articles/dataset/Additional_file_5_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986909/1

  Dataset

• Additional file 7 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

  Her, H.-L. (Creator), Lin, P.-T. (Creator) & Wu, Y.-W. (Creator), Figshare, 2021

  DOI: 10.6084/m9.figshare.16986915.v1, https://springernature.figshare.com/articles/dataset/Additional_file_7_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986915/1

  Dataset

• Additional file 1: of Metagenomic, phylogenetic, and functional characterization of predominant endolithic green sulfur bacteria in the coral Isopora palifera

  Wada, N. (Creator), Jane, W.-N. (Contributor), Wang, L.-T. (Creator), Wu, Y.-T. (Creator), Yamashiro, H. (Creator), Yang, C.-M. (Creator), Lee, D.-C. (Contributor), Lee, T.-C. (Contributor), Liu, C.-T. (Contributor), Lu, C.-Y. (Contributor), Hsiao, S.S.-Y. (Creator), Tang, S.-L. (Creator), Shih, C.-J. (Contributor), Tandon, K. (Contributor), Wu, Y.-W. (Creator), Denis, V. (Creator), Yang, S.-H. (Creator) & Huang, L. (Creator), Figshare, 2019

  DOI: 10.6084/m9.figshare.7547531.v1, https://doi.org/10.6084%2Fm9.figshare.7547531.v1

  Dataset