Projects per year
Personal profile
Education
- 2012 Ph.D., School of Informatics, Indiana University
- 2000 M.S., Department of Computer Science, National Tsing Hua University
- 1998 B.S. Department of Computer Science, Tunghai University
Experience
- 2020- Associate Professor, Graduate Institute of Biomedical Informatics, Taipei Medical University
- 2016-2020 Assistant Professor, Graduate Institute of Biomedical Informatics, Taipei Medical University
- 2016 Project Assistant Research Fellow, Graduate Institute of Biomedical Informatics, Taipei Medical University
- 2016 Postdoctoral Research Fellow, Biodiversity Research Center, Academia Sinica
- 2012-2016 Postdoctoral Research Fellow, Lawrence Berkeley National Lab, USA
- 2007-2012 Research Assistant, School of Informatics and Computing, Indiana University, USA
- 2005-2007 Research Assistant, Institute of Information Science, Academia Sinica
- 2000-2005 Software Engineer, Institute for Information Industry
Research Interests
- Bioinformatics, Metagenomics, Machine Learning
Related Link
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Dive into the research topics where Yu-Wei Wu is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Network
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Comprehensive Mining and Analyzing the Effects of Microbes on Disease Development through Unsupervised Microbial Genome Clustering Tools
8/1/22 → 7/31/23
Project: A - Government Institution › b - Ministry of Science and Technology
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Antimicrobial Resistance Genetic Biomarkers: a Pan-Genome-Based Novel Approach for Pinpointing Antimicrobial Resistance Biomarkers from Bacterial Genomic Sequences (1/3)
8/1/22 → 7/31/23
Project: A - Government Institution › b - Ministry of Science and Technology
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運用機器學習演算法透過基因體資訊挖掘未知基因的功能與預測細菌抗藥性(3/3)
8/1/21 → 7/31/22
Project: A - Government Institution › b - Ministry of Science and Technology
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透過非監督式微生物群基因體分類工具深度挖掘與分析微生物如何影響疾病的產生(1/3)
8/1/21 → 7/31/22
Project: A - Government Institution › b - Ministry of Science and Technology
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運用機器學習演算法透過基因體資訊挖掘未知基因的功能與預測細菌抗藥性(2/3)
8/1/20 → 7/1/21
Project: A - Government Institution › b - Ministry of Science and Technology
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A Cross-Validated Feature Selection (CVFS) approach for extracting the most parsimonious feature sets and discovering potential antimicrobial resistance (AMR) biomarkers
Yang, M. R. & Wu, Y. W., Jan 2023, In: Computational and Structural Biotechnology Journal. 21, p. 769-779 11 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Bioinformatic Analysis Reveals both Oversampled and Underexplored Biosynthetic Diversity in Nonribosomal Peptides
Jian, B. S., Chiou, S. L., Hsu, C. C., Ho, J., Wu, Y. W. & Chu, J., Feb 2023, In: ACS Chemical Biology. 18, 3, p. 476-483 8 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Genome-centered metagenomics illuminates adaptations of core members to a partial Nitritation–Anammox bioreactor under periodic microaeration
Shao, Y. H., Wu, Y. W., Naufal, M. & Wu, J. H., Jan 2023, In: Frontiers in Microbiology. 14, 1046769.Research output: Contribution to journal › Article › peer-review
Open Access -
Human-guided deep learning with ante-hoc explainability by convolutional network from non-image data for pregnancy prognostication
Sufriyana, H., Wu, Y-W. & Su, E. C-Y., Feb 2023, (E-pub ahead of print) In: Neural Networks. 162, p. 99-116 18 p.Research output: Contribution to journal › Article › peer-review
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K-mer-Based Human Gesture Recognition (KHGR) Using Curved Piezoelectric Sensor
Subburaj, S., Yeh, C. H., Patel, B., Huang, T. H., Hung, W. S., Chang, C. Y., Wu, Y. W. & Lin, P. T., Jan 2023, In: Electronics (Switzerland). 12, 1, 210.Research output: Contribution to journal › Article › peer-review
Open Access
Datasets
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MOESM11 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times
Klingeman, D. M. (Creator), Henrissat, B. (Creator), Elkins, J. G. (Creator), Tian, L. (Creator), Shao, X. (Contributor), Yang, Z. K. (Creator), Brown, S. D. (Creator), Podar, M. (Creator), Richard, T. L. (Creator), Wu, Y. (Creator), Whitham, J. M. (Creator), Liang, X. (Contributor), Lynd, L. R. (Creator), Holwerda, E. K. (Creator) & Lombard, V. (Creator), Figshare, 2018
DOI: 10.6084/m9.figshare.7056986.v1, https://doi.org/10.6084%2Fm9.figshare.7056986.v1
Dataset
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Metagenomic, phylogenetic, and functional characterization of predominant endolithic green sulfur bacteria in the coral Isopora palifera
Yang, C. (Creator), Wu, Y. (Creator), Lee, D. (Contributor), Huang, L. (Creator), Yamashiro, H. (Creator), Lu, C. (Contributor), Shih, C. (Contributor), Wu, Y. (Creator), Yang, S. (Creator), Jane, W. (Contributor), Hsiao, S. S. (Creator), Wada, N. (Creator), Tandon, K. (Contributor), Wang, L. (Creator), Denis, V. (Creator), Liu, C. (Contributor), Tang, S. (Creator) & Lee, T. (Contributor), Figshare, 2019
DOI: https://doi.org/10.6084/m9.figshare.c.4355186.v1, https://doi.org/10.6084%2Fm9.figshare.c.4355186.v1
Dataset
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MOESM7 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times
Holwerda, E. K. (Creator), Podar, M. (Creator), Lombard, V. (Creator), Yang, Z. K. (Creator), Richard, T. L. (Creator), Elkins, J. G. (Creator), Lynd, L. R. (Creator), Whitham, J. M. (Creator), Tian, L. (Creator), Shao, X. (Contributor), Wu, Y. (Creator), Brown, S. D. (Creator), Henrissat, B. (Creator), Liang, X. (Contributor) & Klingeman, D. M. (Creator), Figshare, 2018
DOI: 10.6084/m9.figshare.7057109.v1, https://doi.org/10.6084%2Fm9.figshare.7057109.v1
Dataset
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Additional file 8 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains
Her, H. (Creator), Lin, P. (Creator) & Wu, Y. (Creator), Figshare, 2021
DOI: 10.6084/m9.figshare.16986918.v1, https://springernature.figshare.com/articles/dataset/Additional_file_8_of_PangenomeNet_a_pan-genome-based_network_reveals_functional_modules_on_antimicrobial_resistome_for_Escherichia_coli_strains/16986918/1
Dataset
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MOESM6 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times
Wu, Y. (Creator), Liang, X. (Contributor), Richard, T. L. (Creator), Yang, Z. K. (Creator), Brown, S. D. (Creator), Holwerda, E. K. (Creator), Lombard, V. (Creator), Lynd, L. R. (Creator), Klingeman, D. M. (Creator), Elkins, J. G. (Creator), Whitham, J. M. (Creator), Shao, X. (Contributor), Podar, M. (Creator), Tian, L. (Creator) & Henrissat, B. (Creator), Figshare, 2018
DOI: 10.6084/m9.figshare.7057106.v1, https://doi.org/10.6084%2Fm9.figshare.7057106.v1
Dataset